BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D10SP1|AL424963
(1092 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1791 1984 0.0
>3x_Contig1791
Length = 39945
Score = 1984 bits (995), Expect = 0.0
Identities = 1076/1099 (97%), Gaps = 8/1099 (0%)
Strand = Plus / Plus
Query: 1 gtcaatggtawaataaaaagaatagaaatggtctcatatcaaa-cgaaagacttgatata 59
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 20053 gtcaatggtataataaaaagaatagaaatggtctcatatcaaaacgaaagacttgatata 20112
Query: 60 tacgttaaactcttgaagcttgtatttggtctggaaccaaatccaagtgaatataatcga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20113 tacgttaaactcttgaagcttgtatttggtctggaaccaaatccaagtgaatataatcga 20172
Query: 120 tacgaagccaattccatcgaagagagtttcttatttaaccaataatcaaaaagttttggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20173 tacgaagccaattccatcgaagagagtttcttatttaaccaataatcaaaaagttttggc 20232
Query: 180 caagcttcgatctcggaaatagattgagcgatggttcaatgtttttaccgactaavactt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20233 caagcttcgatctcggaaatagattgagcgatggttcaatgtttttaccgactaaaactt 20292
Query: 240 taaaagtatcattctcagaatgccataaattggaaacgatggaaattaagaattcatgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20293 taaaagtatcattctcagaatgccataaattggaaacgatggaaattaagaattcatgca 20352
Query: 300 tgtraatatacaacactgtatcagcgtatgaacagtaaaataacaaattatagttcctta 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20353 tgtaaatatacaacactgtatcagcgtatgaacagtaaaataacaaattatagttcctta 20412
Query: 360 agatagaratcgatatcctatactcctttgccggtatccgccgtctttttgttatataac 419
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20413 agatagaaatcgatatcctatactcctttgccggtatccgccgtctttttgttatataac 20472
Query: 420 ctgtccgtcttattgctacccacattcaaaattctgggacagccatctcggcttcgttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20473 ctgtccgtcttattgctacccacattcaaaattctgggacagccatctcggcttcgttca 20532
Query: 480 gatctgtggcagtcccaacaatataacgcttcatgcgttccaggacttccgcaaattata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20533 gatctgtggcagtcccaacaatataacgcttcatgcgttccaggacttccgcaaattata 20592
Query: 540 cacctgcttccactacttccagaggagcaagagtcgcatatccgtaccttagarattagc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20593 cacctgcttccactacttccagaggagcaagagtcgcatatccgtaccttagaaattagc 20652
Query: 600 cttacatctgaatcacataagggacatcttccatcacatctatcacaaaccttccctaca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20653 cttacatctgaatcacataagggacatcttccatcacatctatcacaaaccttccctaca 20712
Query: 660 gaggttccaggaagtttcatgcacataaccaagtcgtactgatggcgagacatcttaatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20713 gaggttccaggaagtttcatgcacataaccaagtcgtactgatggcgagacatcttaatc 20772
Query: 720 cagtgataatratagtaatataaatagattaataagacctgacggtgtatgggg-aaaac 778
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 20773 cagtgataataatagtaatataaatagattaataagacctgacggtgtatggggaaaaac 20832
Query: 779 acttagttttctgttctttgttttaatatgtgggttcttttagttttgatatctaaggta 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20833 acttagttttctgttctttgttttaatatgtgggttcttttagttttgatatctaaggta 20892
Query: 839 caattttatagaagatgggcttaagtggcagccgttgatttaaacaggaactgatctaca 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20893 caattttatagaagatgggcttaagtggcagccgttgatttaaacaggaactgatctaca 20952
Query: 899 ggataggccaaaaaaacgaagaaaagtaggtttgg-aaccgttcatattatatgaccctc 957
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 20953 ggataggccaaaaaaacgaagaaaagtaggtttggaaaccgttcatattatatgaccctc 21012
Query: 958 cgagcaactacattatatatcacaagatgattg-adtwtgtggtattttgtttggaatct 1016
||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||
Sbjct: 21013 cgagcaactacattatatatcacaagatgattgaaatatgtggta-tttgtttggaatct 21071
Query: 1017 atgattg-aamtgatcaaagggagcttttmcctgttgagcatagatatcatgtttcttgt 1075
|||| || || ||||||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 21072 atgaatgaaactgatcaaggggagcttttaccctgtgagcatagatatcatgtttcttgt 21131
Query: 1076 a-tagg-agtggcacttat 1092
| |||| ||||||||||||
Sbjct: 21132 attaggaagtggcacttat 21150
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7198
Number of Sequences: 1807
Number of extensions: 7198
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 1092
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1076
effective length of database: 10,329,639
effective search space: 11114691564
effective search space used: 11114691564
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)